Phenobook an open source software for phenotypic data collection – Artofit

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Phenobook: an open source software for phenotypic data collection

AbstractBackground. Research projects often involve observation, registration, and data processing starting from information obtained in field experiments.
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PhenoMeNal: processing and analysis of metabolomics data in the cloud

GigaScience Papers
Streaming algorithms for identification of pathogens and antibiotic resistance potential from real-time MinIONTM sequencing - GigaScience

GigaScience Papers
Accumulating computational resource usage of genomic data analysis workflow to optimize cloud computing instance selection

GigaScience Papers
Nanopore sequencing of long ribosomal DNA amplicons enables portable and simple biodiversity assessments with high phylogenetic resolution across broad taxonomic scale

GigaScience Papers
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Chiron: translating nanopore raw signal directly into nucleotide sequence using deep learning

GigaScience Papers
LION/web: a web-based ontology enrichment tool for lipidomic data analysis

GigaScience Papers
YAMP: a containerized workflow enabling reproducibility in metagenomics research

GigaScience Papers
NanoPipe—a web server for nanopore MinION sequencing data analysis

GigaScience Papers
Whole genome sequence analysis of BT-474 using complete Genomics’ standard and long fragment read technologies - GigaScience

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Aequatus: an open-source homology browser

GigaScience Papers
The use of Oxford Nanopore native barcoding for complete genome assembly

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Annotation of the Giardia proteome through structure-based homology and machine learning

GigaScience Papers