Accumulating computational resource usage of genomic data analysis workflow to optimize cloud computing instance selection – Artofit

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Accumulating computational resource usage of genomic data analysis workflow to optimize cloud computing instance selection

AbstractBackground. Container virtualization technologies such as Docker are popular in the bioinformatics domain because they improve the portability and
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Software Development
G-Anchor: a novel approach for whole-genome comparative mapping utilizing evolutionary conserved DNA sequences

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YAMP: a containerized workflow enabling reproducibility in metagenomics research

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Data Pipeline Process

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Combining semi-automated image analysis techniques with machine learning algorithms to accelerate large-scale genetic studies

GigaScience Papers
LION/web: a web-based ontology enrichment tool for lipidomic data analysis

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PhenoMeNal: processing and analysis of metabolomics data in the cloud

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Kronos: a workflow assembler for genome analytics and informatics

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Development and validation of a multi-locus DNA metabarcoding method to identify endangered species in complex samples

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Assessment of the cPAS-based BGISEQ-500 platform for metagenomic sequencing

GigaScience Papers
Phenobook: an open source software for phenotypic data collection

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Streaming algorithms for identification of pathogens and antibiotic resistance potential from real-time MinIONTM sequencing - GigaScience

GigaScience Papers